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Given KEGG codes and a defined organism, it performs the enrichment_analysis with the FELLA package.

Usage

do_FELLA_enrichment_analysis(
  organism_code,
  KEGG_codes,
  path_databases = "C:/databases/FELLA/",
  output_prefix = "",
  output_suffix = ""
)

Arguments

organism_code

character of length 1. The KEGG organism code. For example, for homo sapiens (human) is 'hsa'. All codes are here: https://www.genome.jp/kegg/tables/br08606.html.

KEGG_codes

Character. KEGG codes of compounds.

path_databases

Character of length 1. Path of local organism databases.

output_prefix

Character of length 1. What to add at the beginning of generated file names and object names.

output_suffix

Character of length 1. What to add at the end of generated file names and object names.

Value

Export csv table and png file, along with creating object in the global environment.